Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RAB4AP20338 AC074044.1-201ENST00000609673 707 ntBASIC10.98□□□□□ -0.65
RAB4AP20338 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RAB4AP20338 AL360270.3-201ENST00000609118 1348 ntBASIC10.98□□□□□ -0.65
RAB4AP20338 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
RAB4AP20338 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB4AP20338 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB4AP20338 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RAB4AP20338 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB4AP20338 HK2P1-201ENST00000447818 2737 ntBASIC10.98□□□□□ -0.65
RAB4AP20338 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
RAB4AP20338 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB4AP20338 AC087164.2-201ENST00000624514 3130 ntBASIC10.98□□□□□ -0.65
RAB4AP20338 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB4AP20338 AC125807.2-201ENST00000513358 3514 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RAB4AP20338 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB4AP20338 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
RAB4AP20338 AC074338.1-201ENST00000416825 156 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 AL353705.2-201ENST00000428243 662 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.97□□□□□ -0.65
RAB4AP20338 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.97□□□□□ -0.65
RAB4AP20338 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
RAB4AP20338 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 AC105021.1-202ENST00000570572 669 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.97□□□□□ -0.65
RAB4AP20338 AL513190.1-201ENST00000621254 727 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB4AP20338 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
RAB4AP20338 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB4AP20338 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RAB4AP20338 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB4AP20338 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 AC133065.6-201ENST00000625054 2378 ntBASIC10.97□□□□□ -0.65
RAB4AP20338 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB4AP20338 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
RAB4AP20338 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB4AP20338 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB4AP20338 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
RAB4AP20338 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms