Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 AC092115.1-201ENST00000566277 1402 ntBASIC15.23■□□□□ 0.03
SYN1P17600 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.23■□□□□ 0.03
SYN1P17600 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SYN1P17600 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 Z98885.3-201ENST00000624882 1757 ntBASIC15.22■□□□□ 0.03
SYN1P17600 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SYN1P17600 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 AC092865.2-201ENST00000439409 971 ntBASIC15.22■□□□□ 0.03
SYN1P17600 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 RNF7-205ENST00000480908 782 ntTSL 4 BASIC15.22■□□□□ 0.03
SYN1P17600 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC15.22■□□□□ 0.03
SYN1P17600 MEP1AP1-201ENST00000636082 1097 ntBASIC15.22■□□□□ 0.03
SYN1P17600 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.22■□□□□ 0.03
SYN1P17600 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
SYN1P17600 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SYN1P17600 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.21■□□□□ 0.03
SYN1P17600 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.21■□□□□ 0.03
SYN1P17600 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.21■□□□□ 0.03
SYN1P17600 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.21■□□□□ 0.03
SYN1P17600 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.21■□□□□ 0.03
SYN1P17600 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SYN1P17600 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SYN1P17600 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SYN1P17600 DNM1P46-202ENST00000415963 882 ntBASIC15.21■□□□□ 0.03
SYN1P17600 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.21■□□□□ 0.03
SYN1P17600 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 AC233724.9-201ENST00000511694 407 ntBASIC15.21■□□□□ 0.03
SYN1P17600 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC15.21■□□□□ 0.03
SYN1P17600 PCTP-206ENST00000573500 919 ntTSL 3 BASIC15.21■□□□□ 0.03
SYN1P17600 FAM187B2P-201ENST00000577135 713 ntBASIC15.21■□□□□ 0.03
SYN1P17600 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms