Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM90A23P-201ENST00000400136 1395 ntBASIC13.15□□□□□ -0.3
THBS1P07996 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 AP002353.1-201ENST00000528257 1599 ntBASIC13.15□□□□□ -0.3
THBS1P07996 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
THBS1P07996 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
THBS1P07996 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.15□□□□□ -0.31
THBS1P07996 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
THBS1P07996 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 BRWD1P1-201ENST00000401091 371 ntBASIC13.14□□□□□ -0.31
THBS1P07996 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 POM121L10P-201ENST00000436994 1285 ntBASIC13.14□□□□□ -0.31
THBS1P07996 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
THBS1P07996 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.14□□□□□ -0.31
THBS1P07996 RPL18P13-201ENST00000478088 569 ntBASIC13.14□□□□□ -0.31
THBS1P07996 HLA-J-204ENST00000495278 958 ntBASIC13.14□□□□□ -0.31
THBS1P07996 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 AC135782.3-201ENST00000562782 2105 ntBASIC13.14□□□□□ -0.31
THBS1P07996 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.14□□□□□ -0.31
THBS1P07996 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.14□□□□□ -0.31
THBS1P07996 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 AC103810.3-201ENST00000583567 96 ntBASIC13.14□□□□□ -0.31
THBS1P07996 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.14□□□□□ -0.31
THBS1P07996 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
THBS1P07996 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THBS1P07996 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
THBS1P07996 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.14□□□□□ -0.31
THBS1P07996 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.13□□□□□ -0.31
THBS1P07996 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 RPL13AP3-202ENST00000494676 1473 ntBASIC13.13□□□□□ -0.31
THBS1P07996 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms