Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC005632.3-201ENST00000605544 308 ntBASIC13□□□□□ -0.33
P04436 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13□□□□□ -0.33
P04436 AC087392.5-201ENST00000612517 489 ntBASIC13□□□□□ -0.33
P04436 AC009560.1-201ENST00000620208 434 ntBASIC13□□□□□ -0.33
P04436 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04436 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13□□□□□ -0.33
P04436 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 AC126335.2-201ENST00000623362 4637 ntBASIC13□□□□□ -0.33
P04436 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13□□□□□ -0.33
P04436 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
P04436 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
P04436 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P04436 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04436 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13□□□□□ -0.33
P04436 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 RPL13AP3-202ENST00000494676 1473 ntBASIC12.99□□□□□ -0.33
P04436 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P04436 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P04436 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
P04436 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.99□□□□□ -0.33
P04436 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.99□□□□□ -0.33
P04436 AL627422.1-201ENST00000434104 580 ntBASIC12.99□□□□□ -0.33
P04436 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.99□□□□□ -0.33
P04436 RPL18AP8-201ENST00000486071 528 ntBASIC12.99□□□□□ -0.33
P04436 GOLGA2P8-201ENST00000505201 779 ntBASIC12.99□□□□□ -0.33
P04436 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.99□□□□□ -0.33
P04436 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 AC138701.2-201ENST00000553634 226 ntBASIC12.99□□□□□ -0.33
P04436 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.99□□□□□ -0.33
P04436 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.99□□□□□ -0.33
P04436 AL031713.1-201ENST00000564813 661 ntBASIC12.99□□□□□ -0.33
P04436 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.99□□□□□ -0.33
P04436 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.99□□□□□ -0.33
P04436 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
P04436 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.99□□□□□ -0.33
P04436 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P04436 AL591122.2-201ENST00000624125 1853 ntBASIC12.99□□□□□ -0.33
P04436 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
P04436 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 AC139749.1-202ENST00000617529 3139 ntBASIC12.99□□□□□ -0.33
P04436 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
P04436 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P04436 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04436 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.98□□□□□ -0.33
P04436 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.98□□□□□ -0.33
P04436 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P04436 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P04436 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms