Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.19■□□□□ 0.02
O00370 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
O00370 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.19■□□□□ 0.02
O00370 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
O00370 MIR6787-201ENST00000616675 61 ntBASIC15.19■□□□□ 0.02
O00370 NAP1L6-202ENST00000641404 1222 ntBASIC15.19■□□□□ 0.02
O00370 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.19■□□□□ 0.02
O00370 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
O00370 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.19■□□□□ 0.02
O00370 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
O00370 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.19■□□□□ 0.02
O00370 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.19■□□□□ 0.02
O00370 AL157791.1-201ENST00000553667 1699 ntBASIC15.19■□□□□ 0.02
O00370 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
O00370 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.19■□□□□ 0.02
O00370 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.19■□□□□ 0.02
O00370 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.18■□□□□ 0.02
O00370 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
O00370 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.18■□□□□ 0.02
O00370 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
O00370 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.18■□□□□ 0.02
O00370 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 ACTG1P2-201ENST00000415776 1125 ntBASIC15.18■□□□□ 0.02
O00370 ACTG1P11-201ENST00000425411 1125 ntBASIC15.18■□□□□ 0.02
O00370 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.18■□□□□ 0.02
O00370 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 AL596276.2-201ENST00000447525 331 ntBASIC15.18■□□□□ 0.02
O00370 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.18■□□□□ 0.02
O00370 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 RN7SL277P-201ENST00000481521 288 ntBASIC15.18■□□□□ 0.02
O00370 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.18■□□□□ 0.02
O00370 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.18■□□□□ 0.02
O00370 AC093752.3-201ENST00000567343 901 ntBASIC15.18■□□□□ 0.02
O00370 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.18■□□□□ 0.02
O00370 NDUFV2P1-201ENST00000596415 907 ntBASIC15.18■□□□□ 0.02
O00370 AL022334.2-201ENST00000610000 484 ntBASIC15.18■□□□□ 0.02
O00370 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
O00370 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 BAP1-211ENST00000615113 489 ntBASIC15.18■□□□□ 0.02
O00370 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.18■□□□□ 0.02
O00370 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.18■□□□□ 0.02
O00370 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.18■□□□□ 0.02
O00370 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.18■□□□□ 0.02
O00370 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
O00370 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
O00370 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
O00370 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 LINC00115-201ENST00000473798 1317 ntBASIC15.17■□□□□ 0.02
O00370 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 LINC01815-202ENST00000641468 1409 ntBASIC15.17■□□□□ 0.02
O00370 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
O00370 AL122018.1-201ENST00000446607 2310 ntBASIC15.17■□□□□ 0.02
O00370 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.17■□□□□ 0.02
O00370 AC005014.1-201ENST00000432006 2976 ntBASIC15.17■□□□□ 0.02
O00370 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms