Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 OR7E122P-201ENST00000383606 1017 ntBASIC12.82□□□□□ -0.36
CHD8Q9HCK8 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 ASLP1-201ENST00000428790 637 ntBASIC12.82□□□□□ -0.36
CHD8Q9HCK8 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 MT1G-204ENST00000569500 305 ntTSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 TUBAP-201ENST00000425085 1352 ntBASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 PTPA-219ENST00000435305 530 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC012100.1-201ENST00000470304 282 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 IGHV1OR16-3-201ENST00000568138 205 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MIR378I-201ENST00000582688 76 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC147067.2-201ENST00000608161 289 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC104506.1-201ENST00000609247 429 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 NDUFB2P1-201ENST00000506966 295 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 RN7SL624P-201ENST00000580297 278 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AC116036.2-201ENST00000607592 462 ntBASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.81□□□□□ -0.36
CHD8Q9HCK8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AC089987.2-201ENST00000328207 936 ntBASIC12.8□□□□□ -0.36
CHD8Q9HCK8 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC12.8□□□□□ -0.36
CHD8Q9HCK8 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms