Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 OR8S1-201ENST00000310194 1080 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 RPS9P1-201ENST00000419943 583 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 Z93015.1-201ENST00000451718 390 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 RN7SL277P-201ENST00000481521 288 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC021723.1-201ENST00000486306 515 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 AP005482.1-201ENST00000563722 1273 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC093752.3-201ENST00000567343 901 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 RN7SL560P-201ENST00000577943 264 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 AC010328.2-201ENST00000597698 1111 ntBASIC13□□□□□ -0.33
RSPO3Q9BXY4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13□□□□□ -0.33
RSPO3Q9BXY4 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13□□□□□ -0.33
RSPO3Q9BXY4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PCDHB19P-202ENST00000625133 2914 ntBASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 MIR658-201ENST00000385210 100 ntBASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 EIF4HP1-201ENST00000453115 687 ntBASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 GOLGA2P8-201ENST00000505201 779 ntBASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms