Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AL136309.1-201ENST00000403917 691 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AK2P2-201ENST00000439142 405 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 E2F3P2-201ENST00000447755 1422 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 USP32P1-208ENST00000506594 1164 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SLC25A47P1-201ENST00000531577 414 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 KRT18P8-201ENST00000581937 1246 ntBASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 PDIA3P1-201ENST00000471856 1510 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SHC1P1-201ENST00000425230 1745 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC010141.1-201ENST00000411585 623 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TMEM14DP-201ENST00000422205 345 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TERF1P3-201ENST00000505638 1227 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC008825.2-201ENST00000603374 718 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC006453.4-201ENST00000636949 1252 ntBASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms