Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 ZNF493-208ENST00000599461 1769 ntBASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CHCHD1Q96BP2 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 TUBB3P1-201ENST00000405796 1332 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AL590440.2-201ENST00000641973 1595 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AC009093.10-201ENST00000641956 1442 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SNORA50C-201ENST00000408535 133 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AC004832.2-201ENST00000426397 482 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SPCS2P4-201ENST00000436160 681 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AC026434.2-201ENST00000506094 1078 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 LINC01225-203ENST00000563550 1244 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AP001462.1-201ENST00000594089 452 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 LINC01115-203ENST00000606068 577 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SNORA50.1-201ENST00000628590 135 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AP000550.4-202ENST00000639755 178 ntBASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CHCHD1Q96BP2 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CHCHD1Q96BP2 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms