Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 CD8B2-202ENST00000417670 633 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 FAM197Y7-201ENST00000432892 766 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AL391280.1-201ENST00000506969 1062 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AP000593.2-201ENST00000542775 1433 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 KRT90P-201ENST00000549264 1064 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC106820.3-201ENST00000561653 397 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AL022313.4-201ENST00000562756 2046 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 KRT18P8-201ENST00000581937 1246 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC244669.2-201ENST00000612320 853 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AC020910.5-201ENST00000623668 1865 ntBASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RTN4IP1Q8WWV3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 PCDHB18P-202ENST00000526308 3197 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 BEND3P3-201ENST00000611030 2440 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 USP17L6P-201ENST00000382470 1197 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 CNN2P8-201ENST00000421872 913 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 FAM8A4P-201ENST00000435433 1213 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 GAPDHP21-201ENST00000450301 1010 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms