Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 BEND3P1-201ENST00000421591 1944 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 GUSBP10-201ENST00000417412 665 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 AL354861.1-201ENST00000445213 355 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 AC114501.1-201ENST00000445949 172 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 RN7SL470P-201ENST00000583069 259 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 AC105137.3-201ENST00000617588 984 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 AC025271.4-201ENST00000621477 1726 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 AGGF1P1-201ENST00000509500 2073 ntBASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 IL9RP3-201ENST00000442856 1674 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 RPL13AP19-201ENST00000434320 584 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 LYPLA2P1-203ENST00000447689 696 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 PIN4P1-201ENST00000451079 396 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AP003398.1-201ENST00000531124 318 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CR383656.3-201ENST00000551315 183 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 HERC2P11-201ENST00000562845 725 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AC100756.2-201ENST00000569537 736 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AC067930.6-201ENST00000623257 4947 ntBASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
SHKBP1Q8TBC3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms