Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC006001.1-201ENST00000325130 474 ntBASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 KRT17P7-201ENST00000451704 1104 ntBASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC021016.3-201ENST00000608367 477 ntBASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ZACNP1-201ENST00000612259 710 ntBASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN22Q8N7P3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN22Q8N7P3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 ST13P19-201ENST00000442505 1124 ntBASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 COX20P2-201ENST00000452636 358 ntBASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PPY2P-201ENST00000582808 702 ntBASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms