Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC099336.1-201ENST00000417053 1171 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CSF2RBP1-201ENST00000447905 391 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC124068.2-201ENST00000569473 1109 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AL162426.1-201ENST00000624141 743 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC144522.1-201ENST00000625111 1658 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC073869.1-201ENST00000415574 2762 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC015818.8-201ENST00000587907 1519 ntBASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CYP4F23P-201ENST00000593402 1579 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 YBX1P6-201ENST00000442962 1002 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ACA64.2-201ENST00000459014 129 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 HILS1-202ENST00000545329 423 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 EEF1DP1-201ENST00000585891 896 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AL035252.4-201ENST00000624174 288 ntBASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC00346Q8IVM7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms