Protein–RNA interactions for Protein: Q6PIY5

C1orf228, Uncharacterized protein C1orf228, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228Q6PIY5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 IGLV3-15-201ENST00000518356 244 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 MIR4750-201ENST00000584564 56 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AC138969.2-201ENST00000532739 9932 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 HSPA8P5-201ENST00000456928 2069 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 FAM90A2P-201ENST00000511144 1395 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 FAM90A25P-201ENST00000528404 1395 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AC244394.1-201ENST00000435000 1665 ntBASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C1orf228Q6PIY5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PTENP1-202ENST00000532280 3996 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MIR3147-201ENST00000577811 66 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MIR6720-201ENST00000611664 98 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MIR6074-201ENST00000612054 107 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AL590440.2-201ENST00000641973 1595 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 MST1P2-201ENST00000457982 2291 ntBASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1orf228Q6PIY5 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 AL122018.1-201ENST00000446607 2310 ntBASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1orf228Q6PIY5 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms