Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 GOLGA2P8-201ENST00000505201 779 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 AC126915.1-201ENST00000522847 1038 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.77□□□□□ -0.21
PCDH1Q08174 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.77□□□□□ -0.21
PCDH1Q08174 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
PCDH1Q08174 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 AC072061.1-201ENST00000569710 2234 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 AC104982.3-201ENST00000581995 514 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 AC092299.1-201ENST00000632679 757 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.77□□□□□ -0.21
PCDH1Q08174 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 AC130686.1-201ENST00000622936 2466 ntBASIC13.76□□□□□ -0.21
PCDH1Q08174 AC111170.3-201ENST00000624282 2464 ntBASIC13.76□□□□□ -0.21
PCDH1Q08174 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 AC018735.1-201ENST00000437208 1502 ntBASIC13.76□□□□□ -0.21
PCDH1Q08174 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PCDH1Q08174 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 HCG24-202ENST00000414398 717 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 MARK2P5-201ENST00000507649 634 ntBASIC13.76□□□□□ -0.21
PCDH1Q08174 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.76□□□□□ -0.21
PCDH1Q08174 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.76□□□□□ -0.21
PCDH1Q08174 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.76□□□□□ -0.21
PCDH1Q08174 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDH1Q08174 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDH1Q08174 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDH1Q08174 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDH1Q08174 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 AC061965.1-201ENST00000560524 1465 ntBASIC13.75□□□□□ -0.21
PCDH1Q08174 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDH1Q08174 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDH1Q08174 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDH1Q08174 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCDH1Q08174 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms