Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 AC138028.6-201ENST00000616106 1482 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN20P56880 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.13□□□□□ -0.31
CLDN20P56880 BX284668.4-201ENST00000453917 508 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 SCARNA20.5-201ENST00000516991 142 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 SNORD3B-2-202ENST00000571722 791 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 FAM90A12P-201ENST00000519497 2375 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 FAM90A24P-201ENST00000520792 2369 ntBASIC13.13□□□□□ -0.31
CLDN20P56880 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.12□□□□□ -0.31
CLDN20P56880 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDN20P56880 HIST2H2BC-201ENST00000498492 580 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.12□□□□□ -0.31
CLDN20P56880 AC022217.1-201ENST00000521069 738 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.12□□□□□ -0.31
CLDN20P56880 AP000346.4-201ENST00000614827 381 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 AL136295.7-201ENST00000619226 1200 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
CLDN20P56880 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 AC138969.2-201ENST00000532739 9932 ntBASIC13.12□□□□□ -0.31
CLDN20P56880 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLDN20P56880 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms