Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 ANKRD30BP2-201ENST00000435744 1610 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 SLC6A6P1-201ENST00000413933 1850 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 AP002008.2-201ENST00000635926 4870 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
UBE2AP49459 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 AC112492.5-201ENST00000421897 457 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 FAM8A4P-201ENST00000435433 1213 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 BCRP2-202ENST00000447763 634 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 KRT17P7-201ENST00000451704 1104 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 RN7SL692P-201ENST00000464677 288 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 AC106760.1-201ENST00000508690 800 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 BCRP6-201ENST00000510112 632 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 BCRP7-201ENST00000511549 544 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC9.13□□□□□ -0.95
UBE2AP49459 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 POLE2-203ENST00000553805 496 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 PFAS-212ENST00000625942 396 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 GOLGA8VP-201ENST00000559009 1798 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC9.13□□□□□ -0.95
UBE2AP49459 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 MSTO2P-201ENST00000314835 1709 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC9.13□□□□□ -0.95
UBE2AP49459 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CICP17-201ENST00000418553 2377 ntBASIC9.13□□□□□ -0.95
UBE2AP49459 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
UBE2AP49459 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC9.13□□□□□ -0.95
UBE2AP49459 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
UBE2AP49459 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms