Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.59□□□□□ -0.39
CX3CR1P49238 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.59□□□□□ -0.39
CX3CR1P49238 COX20P2-201ENST00000452636 358 ntBASIC12.59□□□□□ -0.39
CX3CR1P49238 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.59□□□□□ -0.39
CX3CR1P49238 KRT17P8-201ENST00000540749 863 ntBASIC12.59□□□□□ -0.39
CX3CR1P49238 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.59□□□□□ -0.39
CX3CR1P49238 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.59□□□□□ -0.39
CX3CR1P49238 AC009955.4-201ENST00000597192 544 ntBASIC12.59□□□□□ -0.39
CX3CR1P49238 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CX3CR1P49238 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CX3CR1P49238 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CX3CR1P49238 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.59□□□□□ -0.39
CX3CR1P49238 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CX3CR1P49238 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CX3CR1P49238 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CX3CR1P49238 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
CX3CR1P49238 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CX3CR1P49238 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CX3CR1P49238 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CX3CR1P49238 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CX3CR1P49238 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CX3CR1P49238 AC072061.1-201ENST00000569710 2234 ntBASIC12.58□□□□□ -0.39
CX3CR1P49238 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
CX3CR1P49238 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CX3CR1P49238 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.58□□□□□ -0.4
CX3CR1P49238 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.58□□□□□ -0.4
CX3CR1P49238 AC079178.1-201ENST00000420915 656 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 NUTM2HP-201ENST00000442076 2498 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 AL122018.1-201ENST00000446607 2310 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.58□□□□□ -0.4
CX3CR1P49238 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.58□□□□□ -0.4
CX3CR1P49238 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CX3CR1P49238 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 RAB43P1-201ENST00000561790 589 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 AC100827.2-201ENST00000563214 1194 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 AC106886.1-201ENST00000568660 600 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 AC009884.2-201ENST00000603110 324 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CX3CR1P49238 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.58□□□□□ -0.4
CX3CR1P49238 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.58□□□□□ -0.4
CX3CR1P49238 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CX3CR1P49238 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CR1P49238 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms