Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 RBM8B-201ENST00000555532 525 ntBASIC14.86□□□□□ -0.03
MMP13P45452 AC005586.2-201ENST00000563946 837 ntBASIC14.86□□□□□ -0.03
MMP13P45452 MIR497HG-202ENST00000572453 3838 ntBASIC14.86□□□□□ -0.03
MMP13P45452 AC005695.3-201ENST00000614522 232 ntBASIC14.86□□□□□ -0.03
MMP13P45452 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP13P45452 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.86□□□□□ -0.03
MMP13P45452 Z98259.2-201ENST00000641583 609 ntBASIC14.86□□□□□ -0.03
MMP13P45452 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 TUBB8P4-201ENST00000511806 1324 ntBASIC14.86□□□□□ -0.03
MMP13P45452 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP13P45452 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 PCDHB18P-202ENST00000526308 3197 ntBASIC14.85□□□□□ -0.03
MMP13P45452 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 BRWD1P1-201ENST00000401091 371 ntBASIC14.85□□□□□ -0.03
MMP13P45452 AL591846.1-201ENST00000451736 433 ntBASIC14.85□□□□□ -0.03
MMP13P45452 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.85□□□□□ -0.03
MMP13P45452 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.85□□□□□ -0.03
MMP13P45452 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 AC104982.3-201ENST00000581995 514 ntBASIC14.85□□□□□ -0.03
MMP13P45452 AC005962.1-201ENST00000584100 773 ntBASIC14.85□□□□□ -0.03
MMP13P45452 AC091271.1-201ENST00000611877 1162 ntBASIC14.85□□□□□ -0.03
MMP13P45452 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP13P45452 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP13P45452 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 KRT8P29-201ENST00000420409 1371 ntBASIC14.85□□□□□ -0.03
MMP13P45452 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP13P45452 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP13P45452 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms