Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LTBRP36941 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.31□□□□□ -0.12
LTBRP36941 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.31□□□□□ -0.12
LTBRP36941 RN7SL794P-201ENST00000469816 280 ntBASIC14.31□□□□□ -0.12
LTBRP36941 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.31□□□□□ -0.12
LTBRP36941 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.31□□□□□ -0.12
LTBRP36941 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 TPST2P1-201ENST00000564073 1102 ntBASIC14.31□□□□□ -0.12
LTBRP36941 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 NAT9-219ENST00000582524 573 ntTSL 4 BASIC14.31□□□□□ -0.12
LTBRP36941 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 USP17L6P-201ENST00000382470 1197 ntBASIC14.3□□□□□ -0.12
LTBRP36941 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.3□□□□□ -0.12
LTBRP36941 BX088651.3-201ENST00000418155 352 ntBASIC14.3□□□□□ -0.12
LTBRP36941 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.3□□□□□ -0.12
LTBRP36941 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.3□□□□□ -0.12
LTBRP36941 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.3□□□□□ -0.12
LTBRP36941 AL161727.1-201ENST00000457409 530 ntBASIC14.3□□□□□ -0.12
LTBRP36941 SNORA47-201ENST00000458862 138 ntBASIC14.3□□□□□ -0.12
LTBRP36941 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.3□□□□□ -0.12
LTBRP36941 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.3□□□□□ -0.12
LTBRP36941 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 RPL4P6-201ENST00000438116 1304 ntBASIC14.3□□□□□ -0.12
LTBRP36941 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 NRADDP-202ENST00000641269 1585 ntBASIC14.3□□□□□ -0.12
LTBRP36941 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBRP36941 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBRP36941 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBRP36941 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LTBRP36941 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBRP36941 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBRP36941 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms