Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 HNRNPA1P3-201ENST00000440968 551 ntBASIC19.42■□□□□ 0.7
CPS1P31327 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.42■□□□□ 0.7
CPS1P31327 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPS1P31327 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC19.42■□□□□ 0.7
CPS1P31327 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC19.42■□□□□ 0.7
CPS1P31327 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.42■□□□□ 0.7
CPS1P31327 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC19.42■□□□□ 0.7
CPS1P31327 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC19.42■□□□□ 0.7
CPS1P31327 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPS1P31327 AC008622.3-201ENST00000621170 600 ntBASIC19.42■□□□□ 0.7
CPS1P31327 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPS1P31327 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CPS1P31327 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CPS1P31327 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.42■□□□□ 0.7
CPS1P31327 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC19.41■□□□□ 0.7
CPS1P31327 RPL10P8-201ENST00000522888 313 ntBASIC19.41■□□□□ 0.7
CPS1P31327 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC19.41■□□□□ 0.7
CPS1P31327 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 AL109954.3-201ENST00000615088 558 ntBASIC19.41■□□□□ 0.7
CPS1P31327 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 HSPA8P5-201ENST00000456928 2069 ntBASIC19.41■□□□□ 0.7
CPS1P31327 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.41■□□□□ 0.7
CPS1P31327 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPS1P31327 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC19.41■□□□□ 0.7
CPS1P31327 RN7SL47P-201ENST00000488710 299 ntBASIC19.41■□□□□ 0.7
CPS1P31327 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPS1P31327 AC239600.1-201ENST00000603201 462 ntBASIC19.41■□□□□ 0.7
CPS1P31327 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPS1P31327 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC19.41■□□□□ 0.7
CPS1P31327 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC19.4■□□□□ 0.7
CPS1P31327 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.4■□□□□ 0.7
CPS1P31327 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CPS1P31327 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms