Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 AJ011931.1-201ENST00000618749 2492 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 AC008620.2-201ENST00000510294 1569 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 AC068760.1-201ENST00000493579 1953 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 AC091951.1-201ENST00000512854 2465 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 MIR611-201ENST00000384869 67 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 AHCYP3-201ENST00000420053 1279 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXA6P31267 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.8□□□□□ -0.2
HOXA6P31267 SRPK2P-201ENST00000523408 1100 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXA6P31267 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.8□□□□□ -0.2
HOXA6P31267 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXA6P31267 AC245369.7-201ENST00000631386 350 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 BX322534.1-201ENST00000635574 241 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 AC215524.1-201ENST00000635696 241 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 AC090505.1-201ENST00000430515 1834 ntBASIC13.8□□□□□ -0.2
HOXA6P31267 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HOXA6P31267 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
HOXA6P31267 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXA6P31267 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXA6P31267 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXA6P31267 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXA6P31267 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 RNA5SP491-201ENST00000362936 118 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 KRT18P44-201ENST00000416086 1285 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 FAM197Y6-201ENST00000420524 766 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 AC005722.1-201ENST00000431878 964 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 AC010900.1-201ENST00000449849 1296 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 RN7SL578P-201ENST00000477781 283 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 ALG1L15P-201ENST00000482834 794 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 RN7SL523P-201ENST00000484401 298 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 AC026412.1-206ENST00000502273 206 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXA6P31267 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXA6P31267 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXA6P31267 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HOXA6P31267 AC011498.7-201ENST00000624986 2027 ntBASIC13.79□□□□□ -0.2
HOXA6P31267 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXA6P31267 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms