Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
ATP2B1P20020 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 AC004899.1-201ENST00000424687 1714 ntBASIC16.5■□□□□ 0.23
ATP2B1P20020 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.5■□□□□ 0.23
ATP2B1P20020 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATP2B1P20020 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP2B1P20020 AC005014.1-201ENST00000432006 2976 ntBASIC16.5■□□□□ 0.23
ATP2B1P20020 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 AC018735.1-201ENST00000437208 1502 ntBASIC16.5■□□□□ 0.23
ATP2B1P20020 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2B1P20020 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2B1P20020 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATP2B1P20020 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2B1P20020 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2B1P20020 MIR1908-201ENST00000410394 80 ntBASIC16.49■□□□□ 0.23
ATP2B1P20020 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.49■□□□□ 0.23
ATP2B1P20020 FAM58BP-201ENST00000439056 645 ntBASIC16.49■□□□□ 0.23
ATP2B1P20020 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2B1P20020 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2B1P20020 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.49■□□□□ 0.23
ATP2B1P20020 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2B1P20020 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.49■□□□□ 0.23
ATP2B1P20020 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2B1P20020 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 AC021016.3-201ENST00000608367 477 ntBASIC16.49■□□□□ 0.23
ATP2B1P20020 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ATP2B1P20020 AC092299.1-201ENST00000632679 757 ntBASIC16.49■□□□□ 0.23
ATP2B1P20020 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2B1P20020 COL6A4P2-202ENST00000504443 2753 ntBASIC16.49■□□□□ 0.23
ATP2B1P20020 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2B1P20020 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2B1P20020 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 AC004899.2-201ENST00000622993 3860 ntBASIC16.48■□□□□ 0.23
ATP2B1P20020 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2B1P20020 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2B1P20020 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2B1P20020 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2B1P20020 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 TUBB8P8-201ENST00000458717 1058 ntBASIC16.48■□□□□ 0.23
ATP2B1P20020 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2B1P20020 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2B1P20020 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 RN7SL219P-201ENST00000582872 296 ntBASIC16.48■□□□□ 0.23
ATP2B1P20020 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.48■□□□□ 0.23
ATP2B1P20020 AC133540.1-201ENST00000620845 1019 ntBASIC16.48■□□□□ 0.23
ATP2B1P20020 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2B1P20020 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2B1P20020 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2B1P20020 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 275.3 ms