Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 AC126755.1-201ENST00000525846 6405 ntBASIC13.31□□□□□ -0.28
CCL4P13236 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL4P13236 KRT18P62-201ENST00000446618 1287 ntBASIC13.31□□□□□ -0.28
CCL4P13236 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 AC063952.3-201ENST00000467756 308 ntBASIC13.31□□□□□ -0.28
CCL4P13236 AC093300.1-201ENST00000510368 1201 ntBASIC13.31□□□□□ -0.28
CCL4P13236 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL4P13236 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL4P13236 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL4P13236 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CCL4P13236 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL4P13236 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 AC097359.2-201ENST00000604992 2389 ntBASIC13.31□□□□□ -0.28
CCL4P13236 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 CICP24-201ENST00000605464 2705 ntBASIC13.31□□□□□ -0.28
CCL4P13236 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL4P13236 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL4P13236 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL4P13236 AC068760.1-201ENST00000493579 1953 ntBASIC13.31□□□□□ -0.28
CCL4P13236 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL4P13236 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 USP17L6P-201ENST00000382470 1197 ntBASIC13.3□□□□□ -0.28
CCL4P13236 MIR566-201ENST00000385187 94 ntBASIC13.3□□□□□ -0.28
CCL4P13236 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 OR2W2P-201ENST00000406313 909 ntBASIC13.3□□□□□ -0.28
CCL4P13236 OR51A9P-201ENST00000422578 911 ntBASIC13.3□□□□□ -0.28
CCL4P13236 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL4P13236 BPIFB5P-201ENST00000457066 1099 ntBASIC13.3□□□□□ -0.28
CCL4P13236 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCL4P13236 ALG1L3P-201ENST00000503331 765 ntBASIC13.3□□□□□ -0.28
CCL4P13236 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL4P13236 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL4P13236 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL4P13236 AL118516.1-201ENST00000564152 670 ntBASIC13.3□□□□□ -0.28
CCL4P13236 AP005212.2-201ENST00000584979 510 ntBASIC13.3□□□□□ -0.28
CCL4P13236 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL4P13236 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms