Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.92□□□□□ -0.34
FREM3P0C091 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 TUBB8P4-201ENST00000511806 1324 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 MIR33B-201ENST00000385104 96 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
FREM3P0C091 FGFR3P1-201ENST00000449999 601 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 RN7SL258P-201ENST00000478664 300 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 AC104506.1-201ENST00000609247 429 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 AC130686.1-201ENST00000622936 2466 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
FREM3P0C091 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 KLF17P1-201ENST00000547105 1126 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.91□□□□□ -0.34
FREM3P0C091 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 AC051619.9-201ENST00000623237 597 ntBASIC12.91□□□□□ -0.34
FREM3P0C091 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM3P0C091 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FREM3P0C091 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.9□□□□□ -0.34
FREM3P0C091 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.9□□□□□ -0.34
FREM3P0C091 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.9□□□□□ -0.34
FREM3P0C091 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.9□□□□□ -0.34
FREM3P0C091 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.9□□□□□ -0.34
FREM3P0C091 SIGLEC18P-201ENST00000602271 909 ntBASIC12.9□□□□□ -0.34
FREM3P0C091 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.9□□□□□ -0.34
FREM3P0C091 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FREM3P0C091 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms