Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RCC2P1-201ENST00000452257 1476 ntBASIC14.76□□□□□ -0.05
CD48P09326 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CD48P09326 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 AL356585.2-201ENST00000625078 2396 ntBASIC14.75□□□□□ -0.05
CD48P09326 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 MIR3615-201ENST00000581999 87 ntBASIC14.75□□□□□ -0.05
CD48P09326 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.75□□□□□ -0.05
CD48P09326 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.75□□□□□ -0.05
CD48P09326 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.75□□□□□ -0.05
CD48P09326 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CD48P09326 PPT1-213ENST00000641319 2388 ntBASIC14.75□□□□□ -0.05
CD48P09326 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD48P09326 MARK2P9-201ENST00000430958 1727 ntBASIC14.75□□□□□ -0.05
CD48P09326 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
CD48P09326 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.74□□□□□ -0.05
CD48P09326 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.74□□□□□ -0.05
CD48P09326 PTENP1-202ENST00000532280 3996 ntBASIC14.74□□□□□ -0.05
CD48P09326 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.74□□□□□ -0.05
CD48P09326 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CD48P09326 BRD7P5-201ENST00000299197 1822 ntBASIC14.74□□□□□ -0.05
CD48P09326 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CD48P09326 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.74□□□□□ -0.05
CD48P09326 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.74□□□□□ -0.05
CD48P09326 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 AC126915.1-201ENST00000522847 1038 ntBASIC14.74□□□□□ -0.05
CD48P09326 AC013355.1-201ENST00000562625 723 ntBASIC14.74□□□□□ -0.05
CD48P09326 AL132994.2-201ENST00000603120 687 ntBASIC14.74□□□□□ -0.05
CD48P09326 AL008721.1-201ENST00000609964 604 ntBASIC14.74□□□□□ -0.05
CD48P09326 AL008638.5-201ENST00000623814 1298 ntBASIC14.74□□□□□ -0.05
CD48P09326 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 AC005562.1-201ENST00000583030 3219 ntBASIC14.74□□□□□ -0.05
CD48P09326 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 AC068760.1-201ENST00000493579 1953 ntBASIC14.74□□□□□ -0.05
CD48P09326 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 AC020658.7-201ENST00000624274 2442 ntBASIC14.74□□□□□ -0.05
CD48P09326 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.74□□□□□ -0.05
CD48P09326 AC135782.3-201ENST00000562782 2105 ntBASIC14.74□□□□□ -0.05
CD48P09326 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD48P09326 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD48P09326 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms