Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSBP07858 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CTSBP07858 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.4□□□□□ -0.26
CTSBP07858 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.4□□□□□ -0.26
CTSBP07858 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.4□□□□□ -0.26
CTSBP07858 RPSAP31-201ENST00000416648 895 ntBASIC13.4□□□□□ -0.26
CTSBP07858 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 AC098934.1-203ENST00000442868 1262 ntBASIC13.4□□□□□ -0.26
CTSBP07858 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSBP07858 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.4□□□□□ -0.26
CTSBP07858 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.4□□□□□ -0.26
CTSBP07858 SCARNA12-201ENST00000459155 270 ntBASIC13.4□□□□□ -0.26
CTSBP07858 RN7SL788P-201ENST00000460504 316 ntBASIC13.4□□□□□ -0.26
CTSBP07858 AC008267.1-201ENST00000474858 1069 ntBASIC13.4□□□□□ -0.26
CTSBP07858 AC130709.1-201ENST00000484779 1212 ntBASIC13.4□□□□□ -0.26
CTSBP07858 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.4□□□□□ -0.26
CTSBP07858 SIGLEC22P-201ENST00000599104 714 ntBASIC13.4□□□□□ -0.26
CTSBP07858 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.4□□□□□ -0.26
CTSBP07858 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CTSBP07858 AC073911.3-201ENST00000624401 631 ntBASIC13.4□□□□□ -0.26
CTSBP07858 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.4□□□□□ -0.26
CTSBP07858 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSBP07858 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
CTSBP07858 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 TEKT4P2-202ENST00000559466 1312 ntBASIC13.39□□□□□ -0.27
CTSBP07858 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 TCAM1P-207ENST00000485295 1537 ntBASIC13.39□□□□□ -0.27
CTSBP07858 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 AC005014.1-201ENST00000432006 2976 ntBASIC13.39□□□□□ -0.27
CTSBP07858 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSBP07858 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSBP07858 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RN7SKP109-201ENST00000410592 316 ntBASIC13.39□□□□□ -0.27
CTSBP07858 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSBP07858 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSBP07858 RNA5SP417-201ENST00000516459 108 ntBASIC13.39□□□□□ -0.27
CTSBP07858 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSBP07858 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 MIR2392-201ENST00000584881 84 ntBASIC13.39□□□□□ -0.27
CTSBP07858 AP003419.4-201ENST00000616071 517 ntBASIC13.39□□□□□ -0.27
CTSBP07858 COX6A1P2-201ENST00000620597 330 ntBASIC13.39□□□□□ -0.27
CTSBP07858 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 AL139158.3-201ENST00000641212 1562 ntBASIC13.39□□□□□ -0.27
CTSBP07858 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.39□□□□□ -0.27
CTSBP07858 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CTSBP07858 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSBP07858 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSBP07858 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms