Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 BOLA2P3-201ENST00000404566 256 ntBASIC12.72□□□□□ -0.37
APOC1P02654 AC010141.1-201ENST00000411585 623 ntBASIC12.72□□□□□ -0.37
APOC1P02654 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 KRT17P7-201ENST00000451704 1104 ntBASIC12.72□□□□□ -0.37
APOC1P02654 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC1P02654 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.72□□□□□ -0.37
APOC1P02654 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC1P02654 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC1P02654 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 AC073413.1-201ENST00000603927 732 ntBASIC12.72□□□□□ -0.37
APOC1P02654 AL136301.1-201ENST00000615830 422 ntBASIC12.72□□□□□ -0.37
APOC1P02654 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC1P02654 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 AC090643.2-201ENST00000623442 2029 ntBASIC12.72□□□□□ -0.37
APOC1P02654 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APOC1P02654 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.71□□□□□ -0.37
APOC1P02654 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 SHC1P1-201ENST00000425230 1745 ntBASIC12.71□□□□□ -0.37
APOC1P02654 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
APOC1P02654 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
APOC1P02654 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.71□□□□□ -0.37
APOC1P02654 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.71□□□□□ -0.37
APOC1P02654 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 AC023310.1-201ENST00000554836 735 ntBASIC12.71□□□□□ -0.37
APOC1P02654 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APOC1P02654 AL358472.3-201ENST00000608147 415 ntBASIC12.71□□□□□ -0.37
APOC1P02654 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
APOC1P02654 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC1P02654 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.71□□□□□ -0.37
APOC1P02654 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
APOC1P02654 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.71□□□□□ -0.38
APOC1P02654 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC1P02654 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC1P02654 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.7□□□□□ -0.38
APOC1P02654 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOC1P02654 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC1P02654 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms