Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AL022313.4-201ENST00000562756 2046 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ACTBP11-201ENST00000436287 1126 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC007274.1-201ENST00000439805 662 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC106794.1-201ENST00000506935 792 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 RN7SL163P-201ENST00000583100 276 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 BNIP3P13-201ENST00000599968 566 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC092299.1-201ENST00000632679 757 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC004923.1-202ENST00000642106 209 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GRK6P1-201ENST00000400595 1711 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 MST1P2-201ENST00000457982 2291 ntBASIC10.74□□□□□ -0.69
KNCNA6PVL3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KNCNA6PVL3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
KNCNA6PVL3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 AC041040.2-201ENST00000622926 2899 ntBASIC10.73□□□□□ -0.69
KNCNA6PVL3 AC018629.1-201ENST00000623381 1736 ntBASIC10.73□□□□□ -0.69
KNCNA6PVL3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.73□□□□□ -0.69
KNCNA6PVL3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KNCNA6PVL3 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.73□□□□□ -0.69
KNCNA6PVL3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms