Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 AL096865.1-201ENST00000606796 927 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 KHSRPP1-201ENST00000427983 1768 ntBASIC15.57■□□□□ 0.08
CCDC66A2RUB6 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC66A2RUB6 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 BCRP1-201ENST00000444246 691 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 UGT1A2P-201ENST00000454886 866 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 GCOM2-201ENST00000509133 1104 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 AJ011932.1-201ENST00000621707 465 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 AC015688.4-201ENST00000580780 1647 ntBASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC66A2RUB6 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms