Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC004623.1-201ENST00000624592 2127 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC087499.6-201ENST00000411576 835 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 PON3-203ENST00000427422 894 ntTSL 3 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 METTL21AP1-201ENST00000438852 635 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CICP12-201ENST00000455801 843 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC093512.1-201ENST00000617969 520 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SON-203ENST00000381679 7860 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CES1P1-201ENST00000421606 1704 ntBASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBE2D4Q9Y2X8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AL138709.1-201ENST00000614840 1693 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms