Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC069120.2-201ENST00000524091 540 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC120045.2-201ENST00000567334 178 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 BRI3BPP1-201ENST00000594224 787 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SRD5A3P1-201ENST00000603021 949 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 BX088702.1-201ENST00000610784 235 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC027369.3-201ENST00000530465 3707 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AL022323.5-201ENST00000624101 2059 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 AC020910.5-201ENST00000623668 1865 ntBASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.72□□□□□ -0.53
RCL1Q9Y2P8 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 AP003969.2-201ENST00000623739 2275 ntBASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 AC125807.1-201ENST00000483097 614 ntBASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RCL1Q9Y2P8 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RCL1Q9Y2P8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 GHET1-201ENST00000627071 1906 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms