Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 AL135901.1-201ENST00000451812 333 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 SIGLEC22P-201ENST00000599104 714 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC010976.2-201ENST00000609697 852 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 AL118522.1-201ENST00000611368 560 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 TCAF1P1-201ENST00000414990 2232 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.22■□□□□ 0.67
USP35Q9P2H5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP35Q9P2H5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP35Q9P2H5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 BX640514.1-201ENST00000583223 1918 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AL672207.1-201ENST00000328462 1570 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC093826.1-201ENST00000508655 993 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 GOLGA2P7-209ENST00000560408 745 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 MIR5001-201ENST00000580185 100 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP35Q9P2H5 DGCR9-201ENST00000609630 2415 ntBASIC19.21■□□□□ 0.67
USP35Q9P2H5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP35Q9P2H5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms