Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC104115.1-201ENST00000484005 623 ntBASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC007992.1-201ENST00000513953 953 ntBASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC068134.4-201ENST00000613365 122 ntBASIC12.84□□□□□ -0.35
CHD8Q9HCK8 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 USP8-219ENST00000625664 1568 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AC096677.3-201ENST00000413162 387 ntBASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 snoZ6.3-201ENST00000583496 76 ntBASIC12.83□□□□□ -0.35
CHD8Q9HCK8 AC069366.2-201ENST00000583643 430 ntBASIC12.83□□□□□ -0.35
CHD8Q9HCK8 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.83□□□□□ -0.35
CHD8Q9HCK8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 C18orf15-201ENST00000623680 2534 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 KLK8-203ENST00000347619 555 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 HLA-DQB3-203ENST00000425319 356 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 HNRNPA1P9-201ENST00000450624 950 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC020893.2-201ENST00000506083 723 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC114812.4-201ENST00000506676 757 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC096713.1-201ENST00000514650 978 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 MROH4P-201ENST00000431302 1578 ntBASIC12.83□□□□□ -0.36
CHD8Q9HCK8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHD8Q9HCK8 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 SNORA74.2-201ENST00000516496 180 ntBASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHD8Q9HCK8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms