Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 AC006480.2-201ENST00000609770 1337 ntBASIC15.11■□□□□ 0.01
ATP2A3Q93084 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 CYP4F23P-201ENST00000593402 1579 ntBASIC15.11■□□□□ 0.01
ATP2A3Q93084 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 AL136172.1-201ENST00000598590 1394 ntBASIC15.11■□□□□ 0.01
ATP2A3Q93084 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC008723.1-201ENST00000506922 207 ntBASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC022447.6-201ENST00000515522 438 ntBASIC15.1■□□□□ 0.01
ATP2A3Q93084 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 FRMPD2B-201ENST00000431305 1347 ntBASIC15.1■□□□□ 0.01
ATP2A3Q93084 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 AC010327.5-201ENST00000586923 3061 ntBASIC15.1■□□□□ 0.01
ATP2A3Q93084 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ATP2A3Q93084 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATP2A3Q93084 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP2A3Q93084 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.09■□□□□ 0.01
ATP2A3Q93084 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms