Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 POM121L10P-201ENST00000436994 1285 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 GOLGA2P4-201ENST00000441462 777 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 RPL13AP20-201ENST00000459725 609 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 RPL18P13-201ENST00000478088 569 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 FAM86HP-204ENST00000513466 959 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL512310.5-201ENST00000551999 515 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL583810.1-201ENST00000553344 1045 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AC008805.1-201ENST00000590892 364 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 BNIP3P13-201ENST00000599968 566 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 CCT8L1P-201ENST00000465400 1674 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL157996.1-201ENST00000624684 2299 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 FP325330.2-201ENST00000624219 5630 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AC007952.5-201ENST00000572818 1486 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 KRT18P36-201ENST00000411618 1276 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 XBP1P1-201ENST00000436573 652 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 RNMTL1P1-201ENST00000454103 560 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 HLA-J-204ENST00000495278 958 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 SCARNA21-201ENST00000517026 139 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms