Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC092580.1-201ENST00000433998 658 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 RPL18P13-201ENST00000478088 569 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC005730.2-201ENST00000564549 1184 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC009542.2-202ENST00000619004 1067 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 CR392039.2-201ENST00000623182 509 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 RCC2P1-201ENST00000452257 1476 ntBASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDKL3Q8IVW4 SHMT1P1-201ENST00000419974 1312 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AC063926.2-201ENST00000623766 1308 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 MARK2P9-201ENST00000430958 1727 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AL391647.1-201ENST00000395664 511 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 XBP1P1-201ENST00000436573 652 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 VDAC1P1-201ENST00000439229 848 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 RPSAP36-202ENST00000494591 1261 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AC005324.6-201ENST00000587972 613 ntBASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDKL3Q8IVW4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms