Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 RPL7P3-201ENST00000441388 714 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC100850.1-201ENST00000506768 649 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC022217.1-201ENST00000521069 738 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC140658.4-201ENST00000561990 352 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AGAP12P-201ENST00000585227 2359 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC027612.1-201ENST00000445234 2395 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC004241.5-201ENST00000623870 2448 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC103592.1-201ENST00000394513 664 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC012441.2-201ENST00000444843 739 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC079316.1-201ENST00000548397 411 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC023310.1-201ENST00000554836 735 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 Z98259.2-201ENST00000641583 609 ntBASIC13.32□□□□□ -0.28
REEP3Q6NUK4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms