Protein–RNA interactions for Protein: Q01082

SPTBN1, Spectrin beta chain, non-erythrocytic 1, humanhuman

Known RBP Predictions only

Length 2,364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1Q01082 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 OR52M2P-201ENST00000414298 959 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 STK24P1-201ENST00000455035 1291 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 PEBP1P3-201ENST00000455475 548 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 AC005740.1-201ENST00000515639 522 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTBN1Q01082 AC079414.2-201ENST00000567157 1104 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SPTBN1Q01082 GGNBP1-204ENST00000613113 887 ntBASIC12.54□□□□□ -0.4
SPTBN1Q01082 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RHOQP2-201ENST00000449922 579 ntBASIC12.53□□□□□ -0.4
SPTBN1Q01082 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 AC140658.4-201ENST00000561990 352 ntBASIC12.53□□□□□ -0.4
SPTBN1Q01082 CES1P2-201ENST00000566467 1242 ntBASIC12.53□□□□□ -0.4
SPTBN1Q01082 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.53□□□□□ -0.4
SPTBN1Q01082 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTBN1Q01082 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AL121949.3-201ENST00000406684 385 ntBASIC12.52□□□□□ -0.4
SPTBN1Q01082 AC006328.1-201ENST00000437571 379 ntBASIC12.52□□□□□ -0.4
SPTBN1Q01082 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 RNA5SP406-201ENST00000516106 112 ntBASIC12.52□□□□□ -0.4
SPTBN1Q01082 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AP006248.1-201ENST00000610471 67 ntBASIC12.52□□□□□ -0.4
SPTBN1Q01082 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AC005865.2-202ENST00000635814 725 ntBASIC12.52□□□□□ -0.4
SPTBN1Q01082 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTBN1Q01082 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.52□□□□□ -0.4
SPTBN1Q01082 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTBN1Q01082 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.52□□□□□ -0.41
SPTBN1Q01082 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms