Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
UBA52P62987 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.45□□□□□ -0.42
UBA52P62987 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.45□□□□□ -0.42
UBA52P62987 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 AC025279.2-201ENST00000569730 653 ntBASIC12.45□□□□□ -0.42
UBA52P62987 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.45□□□□□ -0.42
UBA52P62987 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.45□□□□□ -0.42
UBA52P62987 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AC020910.6-201ENST00000623084 1459 ntBASIC12.45□□□□□ -0.42
UBA52P62987 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
UBA52P62987 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.44□□□□□ -0.42
UBA52P62987 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 AC111170.3-201ENST00000624282 2464 ntBASIC12.44□□□□□ -0.42
UBA52P62987 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
UBA52P62987 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.44□□□□□ -0.42
UBA52P62987 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 AP001258.2-201ENST00000529891 490 ntBASIC12.44□□□□□ -0.42
UBA52P62987 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.44□□□□□ -0.42
UBA52P62987 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.44□□□□□ -0.42
UBA52P62987 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.44□□□□□ -0.42
UBA52P62987 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 AC097359.3-201ENST00000603982 1210 ntBASIC12.44□□□□□ -0.42
UBA52P62987 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.44□□□□□ -0.42
UBA52P62987 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.44□□□□□ -0.42
UBA52P62987 AC138951.2-201ENST00000623455 1161 ntBASIC12.44□□□□□ -0.42
UBA52P62987 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
UBA52P62987 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
UBA52P62987 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
UBA52P62987 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UBA52P62987 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBA52P62987 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
UBA52P62987 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms