Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.06■□□□□ 0
USP46P62068 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC15.06■□□□□ 0
USP46P62068 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
USP46P62068 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.06■□□□□ 0
USP46P62068 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
USP46P62068 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
USP46P62068 AC140658.4-201ENST00000561990 352 ntBASIC15.06■□□□□ 0
USP46P62068 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.06■□□□□ 0
USP46P62068 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.06■□□□□ 0
USP46P62068 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.06■□□□□ 0
USP46P62068 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.06■□□□□ 0
USP46P62068 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 KRT18P9-201ENST00000604826 1300 ntBASIC15.06■□□□□ 0
USP46P62068 Z82170.1-201ENST00000625081 3192 ntBASIC15.06■□□□□ 0
USP46P62068 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.06■□□□□ 0
USP46P62068 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.06■□□□□ 0
USP46P62068 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.06■□□□□ 0
USP46P62068 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
USP46P62068 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USP46P62068 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.05■□□□□ 0
USP46P62068 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.05■□□□□ 0
USP46P62068 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.05■□□□□ 0
USP46P62068 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
USP46P62068 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 AC027612.1-201ENST00000445234 2395 ntBASIC15.05■□□□□ 0
USP46P62068 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
USP46P62068 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
USP46P62068 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USP46P62068 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.05■□□□□ 0
USP46P62068 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 MIR33B-201ENST00000385104 96 ntBASIC15.05■□□□□ -0
USP46P62068 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
USP46P62068 FTLP1-201ENST00000449155 526 ntBASIC15.05■□□□□ -0
USP46P62068 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 NDUFS6P1-201ENST00000485187 316 ntBASIC15.05■□□□□ -0
USP46P62068 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC15.05■□□□□ -0
USP46P62068 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.05■□□□□ -0
USP46P62068 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.05■□□□□ -0
USP46P62068 MIR4706-201ENST00000582134 82 ntBASIC15.05■□□□□ -0
USP46P62068 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 SIGLEC18P-201ENST00000602271 909 ntBASIC15.05■□□□□ -0
USP46P62068 AL353726.2-201ENST00000623259 884 ntBASIC15.05■□□□□ -0
USP46P62068 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
USP46P62068 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.05■□□□□ -0
USP46P62068 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
USP46P62068 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
USP46P62068 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
USP46P62068 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USP46P62068 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.05■□□□□ -0
USP46P62068 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.04■□□□□ -0
USP46P62068 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.04■□□□□ -0
USP46P62068 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.04■□□□□ -0
USP46P62068 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USP46P62068 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.04■□□□□ -0
USP46P62068 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USP46P62068 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USP46P62068 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
USP46P62068 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.04■□□□□ -0
USP46P62068 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USP46P62068 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USP46P62068 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms