Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 AC079336.7-201ENST00000623428 1078 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 MST1P2-201ENST00000457982 2291 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 AC117489.1-201ENST00000625169 3217 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 AC067931.2-201ENST00000623655 2003 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 OR2K2-202ENST00000374428 1038 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 MIR645-201ENST00000385283 94 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 AK2P2-201ENST00000439142 405 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 UPF3AP2-201ENST00000457924 1132 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 RN7SL769P-201ENST00000469386 295 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.31□□□□□ -0.12
AP1S1P61966 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.31□□□□□ -0.12
AP1S1P61966 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
AP1S1P61966 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.31□□□□□ -0.12
AP1S1P61966 MIR3677-201ENST00000578964 60 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 AC007326.1-201ENST00000604539 458 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 AL928921.2-201ENST00000641325 2442 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP1S1P61966 RCC2P1-201ENST00000452257 1476 ntBASIC14.31□□□□□ -0.12
AP1S1P61966 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AP1S1P61966 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AP1S1P61966 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AP1S1P61966 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 RPL8P2-201ENST00000430538 502 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 AC234782.1-201ENST00000451950 919 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 IMP3P2-201ENST00000489760 475 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms