Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 IGHV1-12-201ENST00000518307 205 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 AC013553.1-201ENST00000560906 267 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 AC006483.2-201ENST00000609813 515 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLDN6P56747 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLDN6P56747 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 AL357373.1-201ENST00000394974 322 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN6P56747 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 AC098934.1-203ENST00000442868 1262 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN6P56747 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC026470.1-201ENST00000478038 846 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN6P56747 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 NDUFB10P1-201ENST00000567319 521 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 AL627230.2-201ENST00000613254 655 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 CASP16P-204ENST00000635032 809 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 AC106881.1-201ENST00000605849 3329 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLDN6P56747 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC018529.2-202ENST00000611482 3087 ntBASIC13.64□□□□□ -0.23
CLDN6P56747 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
CLDN6P56747 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDN6P56747 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN6P56747 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN6P56747 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLDN6P56747 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN6P56747 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms