Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH8P55286 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH8P55286 SHMT1P1-201ENST00000419974 1312 ntBASIC15.18■□□□□ 0.02
CDH8P55286 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 TBC1D3J-201ENST00000620719 1426 ntBASIC15.18■□□□□ 0.02
CDH8P55286 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH8P55286 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH8P55286 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.18■□□□□ 0.02
CDH8P55286 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH8P55286 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH8P55286 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH8P55286 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH8P55286 KRT18P9-201ENST00000604826 1300 ntBASIC15.17■□□□□ 0.02
CDH8P55286 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 AC041040.2-201ENST00000622926 2899 ntBASIC15.17■□□□□ 0.02
CDH8P55286 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDH8P55286 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 AC005840.4-201ENST00000541242 2494 ntBASIC15.17■□□□□ 0.02
CDH8P55286 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH8P55286 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH8P55286 AC073869.2-201ENST00000417338 1026 ntBASIC15.17■□□□□ 0.02
CDH8P55286 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH8P55286 RPL8P2-201ENST00000430538 502 ntBASIC15.17■□□□□ 0.02
CDH8P55286 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH8P55286 RN7SL67P-201ENST00000492147 296 ntBASIC15.17■□□□□ 0.02
CDH8P55286 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.17■□□□□ 0.02
CDH8P55286 AC005740.1-201ENST00000515639 522 ntBASIC15.17■□□□□ 0.02
CDH8P55286 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 AC134698.3-201ENST00000523880 214 ntBASIC15.17■□□□□ 0.02
CDH8P55286 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 AL021707.6-201ENST00000609212 491 ntBASIC15.17■□□□□ 0.02
CDH8P55286 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms