Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CHMP24386 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.42□□□□□ -0.26
CHMP24386 MIR663B-201ENST00000408361 115 ntBASIC13.42□□□□□ -0.26
CHMP24386 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.42□□□□□ -0.26
CHMP24386 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 AC108725.1-201ENST00000495472 409 ntBASIC13.42□□□□□ -0.26
CHMP24386 AC100850.1-201ENST00000506768 649 ntBASIC13.42□□□□□ -0.26
CHMP24386 GCOM2-201ENST00000509133 1104 ntBASIC13.42□□□□□ -0.26
CHMP24386 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.42□□□□□ -0.26
CHMP24386 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 AC103988.2-201ENST00000561804 725 ntBASIC13.42□□□□□ -0.26
CHMP24386 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CHMP24386 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.42□□□□□ -0.26
CHMP24386 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.42□□□□□ -0.26
CHMP24386 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 AL136301.1-201ENST00000615830 422 ntBASIC13.42□□□□□ -0.26
CHMP24386 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 AC004241.5-201ENST00000623870 2448 ntBASIC13.42□□□□□ -0.26
CHMP24386 AC020907.1-201ENST00000616460 1350 ntBASIC13.42□□□□□ -0.26
CHMP24386 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHMP24386 AC083964.2-201ENST00000623988 2396 ntBASIC13.42□□□□□ -0.26
CHMP24386 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.42□□□□□ -0.26
CHMP24386 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHMP24386 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
CHMP24386 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.41□□□□□ -0.26
CHMP24386 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.41□□□□□ -0.26
CHMP24386 AC010141.1-201ENST00000411585 623 ntBASIC13.41□□□□□ -0.26
CHMP24386 AL354877.1-201ENST00000424412 413 ntBASIC13.41□□□□□ -0.26
CHMP24386 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.41□□□□□ -0.26
CHMP24386 POM121L10P-201ENST00000436994 1285 ntBASIC13.41□□□□□ -0.26
CHMP24386 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.41□□□□□ -0.26
CHMP24386 SORD2P-201ENST00000558556 1069 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 617 ms