Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A1P22736 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A1P22736 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NR4A1P22736 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.38□□□□□ -0.27
NR4A1P22736 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.38□□□□□ -0.27
NR4A1P22736 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
NR4A1P22736 AL360270.3-201ENST00000609118 1348 ntBASIC13.38□□□□□ -0.27
NR4A1P22736 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A1P22736 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NR4A1P22736 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.38□□□□□ -0.27
NR4A1P22736 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
NR4A1P22736 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NR4A1P22736 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 RN7SL837P-201ENST00000463010 287 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 GAPDHP40-201ENST00000505218 1006 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A1P22736 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NR4A1P22736 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 CU634019.7-201ENST00000624153 1185 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 FP236241.2-201ENST00000624906 1185 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 AC015819.3-201ENST00000624305 2674 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 LINC02486-201ENST00000604157 3000 ntBASIC13.37□□□□□ -0.27
NR4A1P22736 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NR4A1P22736 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A1P22736 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A1P22736 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A1P22736 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NR4A1P22736 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.36□□□□□ -0.27
NR4A1P22736 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.36□□□□□ -0.27
NR4A1P22736 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 AC132938.2-201ENST00000579188 680 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 AC239800.4-201ENST00000603712 296 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms