Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CTRB1P17538 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.09□□□□□ -0.47
CTRB1P17538 MEP1AP4-201ENST00000423244 1087 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.09□□□□□ -0.47
CTRB1P17538 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 FAM86LP-201ENST00000478302 853 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 DOC2GP-202ENST00000514950 1163 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.09□□□□□ -0.47
CTRB1P17538 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.09□□□□□ -0.47
CTRB1P17538 TPRX2P-201ENST00000535362 881 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.09□□□□□ -0.47
CTRB1P17538 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.09□□□□□ -0.47
CTRB1P17538 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.09□□□□□ -0.47
CTRB1P17538 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CTRB1P17538 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CTRB1P17538 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CTRB1P17538 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CTRB1P17538 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CTRB1P17538 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CTRB1P17538 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CTRB1P17538 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.08□□□□□ -0.47
CTRB1P17538 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 FP325332.1-201ENST00000624818 2045 ntBASIC12.08□□□□□ -0.48
CTRB1P17538 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CTRB1P17538 AL357054.4-201ENST00000606285 2814 ntBASIC12.08□□□□□ -0.48
CTRB1P17538 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.08□□□□□ -0.48
CTRB1P17538 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.08□□□□□ -0.48
CTRB1P17538 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CTRB1P17538 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CTRB1P17538 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CTRB1P17538 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.08□□□□□ -0.48
CTRB1P17538 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CTRB1P17538 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.08□□□□□ -0.48
CTRB1P17538 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.08□□□□□ -0.48
CTRB1P17538 RN7SL399P-201ENST00000471648 279 ntBASIC12.08□□□□□ -0.48
CTRB1P17538 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms