Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CTLA4P16410 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTLA4P16410 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTLA4P16410 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTLA4P16410 FAM90A7P-201ENST00000382628 1395 ntBASIC12.68□□□□□ -0.38
CTLA4P16410 FAM90A23P-201ENST00000400136 1395 ntBASIC12.68□□□□□ -0.38
CTLA4P16410 KRT8P29-201ENST00000420409 1371 ntBASIC12.68□□□□□ -0.38
CTLA4P16410 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTLA4P16410 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTLA4P16410 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 AL031595.1-201ENST00000623969 4709 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.67□□□□□ -0.38
CTLA4P16410 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CTLA4P16410 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.67□□□□□ -0.38
CTLA4P16410 XBP1P1-201ENST00000436573 652 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.67□□□□□ -0.38
CTLA4P16410 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 AC021723.1-201ENST00000486306 515 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.67□□□□□ -0.38
CTLA4P16410 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 AL096828.3-201ENST00000615354 462 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 AC092299.1-201ENST00000632679 757 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 AGAP12P-201ENST00000585227 2359 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 MARK2P9-201ENST00000430958 1727 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
CTLA4P16410 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTLA4P16410 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CTLA4P16410 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 AC005252.3-201ENST00000623855 2258 ntBASIC12.67□□□□□ -0.38
CTLA4P16410 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTLA4P16410 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 LINC00115-201ENST00000473798 1317 ntBASIC12.66□□□□□ -0.38
CTLA4P16410 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 MIR658-201ENST00000385210 100 ntBASIC12.66□□□□□ -0.38
CTLA4P16410 AC103592.1-201ENST00000394513 664 ntBASIC12.66□□□□□ -0.38
CTLA4P16410 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CTLA4P16410 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.66□□□□□ -0.38
CTLA4P16410 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTLA4P16410 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.66□□□□□ -0.38
CTLA4P16410 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.66□□□□□ -0.38
CTLA4P16410 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms