Protein–RNA interactions for Protein: P10071

GLI3, Transcriptional activator GLI3, humanhuman

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3P10071 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.07■□□□□ 0.48
GLI3P10071 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.07■□□□□ 0.48
GLI3P10071 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC18.07■□□□□ 0.48
GLI3P10071 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC18.07■□□□□ 0.48
GLI3P10071 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GLI3P10071 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GLI3P10071 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.06■□□□□ 0.48
GLI3P10071 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 HSPA8P5-201ENST00000456928 2069 ntBASIC18.06■□□□□ 0.48
GLI3P10071 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
GLI3P10071 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 POLR3DP1-201ENST00000398689 1176 ntBASIC18.06■□□□□ 0.48
GLI3P10071 AC138392.1-201ENST00000427577 921 ntBASIC18.06■□□□□ 0.48
GLI3P10071 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
GLI3P10071 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC18.06■□□□□ 0.48
GLI3P10071 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC18.06■□□□□ 0.48
GLI3P10071 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.06■□□□□ 0.48
GLI3P10071 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GLI3P10071 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GLI3P10071 AC097359.2-201ENST00000604992 2389 ntBASIC18.06■□□□□ 0.48
GLI3P10071 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.06■□□□□ 0.48
GLI3P10071 AC026271.1-201ENST00000447794 1348 ntBASIC18.06■□□□□ 0.48
GLI3P10071 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.06■□□□□ 0.48
GLI3P10071 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GLI3P10071 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
GLI3P10071 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 PMF1-201ENST00000368273 884 ntTSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 TMEM256P1-201ENST00000430550 340 ntBASIC18.05■□□□□ 0.48
GLI3P10071 RN7SL22P-201ENST00000471800 269 ntBASIC18.05■□□□□ 0.48
GLI3P10071 RN7SL477P-201ENST00000488440 286 ntBASIC18.05■□□□□ 0.48
GLI3P10071 RN7SL646P-201ENST00000492969 297 ntBASIC18.05■□□□□ 0.48
GLI3P10071 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.05■□□□□ 0.48
GLI3P10071 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.05■□□□□ 0.48
GLI3P10071 AC137723.2-201ENST00000623540 398 ntBASIC18.05■□□□□ 0.48
GLI3P10071 SNORA50D-202ENST00000627561 132 ntBASIC18.05■□□□□ 0.48
GLI3P10071 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.05■□□□□ 0.48
GLI3P10071 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.05■□□□□ 0.48
GLI3P10071 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC18.05■□□□□ 0.48
GLI3P10071 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.05■□□□□ 0.48
GLI3P10071 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC18.05■□□□□ 0.48
GLI3P10071 AC020910.6-201ENST00000623084 1459 ntBASIC18.05■□□□□ 0.48
GLI3P10071 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GLI3P10071 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.04■□□□□ 0.48
GLI3P10071 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GLI3P10071 SERPINB8P1-201ENST00000401898 377 ntBASIC18.04■□□□□ 0.48
GLI3P10071 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC18.04■□□□□ 0.48
GLI3P10071 TUBB8P9-201ENST00000422534 1276 ntBASIC18.04■□□□□ 0.48
GLI3P10071 TUBB8P10-201ENST00000430210 1279 ntBASIC18.04■□□□□ 0.48
GLI3P10071 AC012513.2-201ENST00000441511 1137 ntBASIC18.04■□□□□ 0.48
GLI3P10071 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GLI3P10071 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GLI3P10071 MIR4459-201ENST00000581837 66 ntBASIC18.04■□□□□ 0.48
GLI3P10071 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GLI3P10071 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GLI3P10071 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GLI3P10071 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GLI3P10071 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GLI3P10071 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
GLI3P10071 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms