Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 MRPL22P1-201ENST00000505398 616 ntBASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC138701.2-201ENST00000553634 226 ntBASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 AC104506.1-201ENST00000609247 429 ntBASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAB40ALP0C0E4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 LINC01230-201ENST00000625222 3017 ntBASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.46□□□□□ -0.26
RAB40ALP0C0E4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 TEKT4P2-202ENST00000559466 1312 ntBASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AC064801.2-201ENST00000625052 1303 ntBASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AGGF1P1-201ENST00000509500 2073 ntBASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 Z69890.1-201ENST00000382990 339 ntBASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AL512306.1-201ENST00000432698 848 ntBASIC13.45□□□□□ -0.26
RAB40ALP0C0E4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms